Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
KIRP rs6001920 chr22:40850066 T/C 8.51E-5 287 26.4 23.73 12.1 KM Plot
KIRP rs60041842 chr11:47191309 G/A 5.15E-6 287 25.57 28.03 12.63 KM Plot
KIRP rs60088916 chr11:47115967 C/T 7.35E-12 288 25.4 31.87 10.82 KM Plot
KIRP rs60164048 chr10:75046929 G/T 8.77E-15 289 26.37 22.8 5.6 KM Plot
KIRP rs60174717 chr11:47106994 G/A 7.35E-12 288 25.4 31.87 10.82 KM Plot
KIRP rs60201196 chr11:47110592 C/T 7.35E-12 288 25.4 31.87 10.82 KM Plot
KIRP rs60231018 chr19:16530143 G/A 2.11E-15 285 26 21.43 8.08 KM Plot
KIRP rs60308950 chr11:20976323 C/G 1.29E-5 289 25.57 30.8 19.58 KM Plot
KIRP rs60332249 chr10:74972535 C/CAT 8.55E-15 287 26.4 20.53 5.6 KM Plot
KIRP rs60335739 chr11:47148728 C/T 8.53E-7 287 25.4 31.87 12.63 KM Plot
KIRP rs60365066 chr19:16523589 G/A 2.11E-15 285 26 21.43 8.08 KM Plot
KIRP rs6038359 chr20:6094217 C/T 0.000124 287 25.67 26.4 9 KM Plot
KIRP rs60433268 chr1:26548055 A/C 7.51E-5 284 25.7 28.87 13.17 KM Plot
KIRP rs60492656 chr4:875008 C/T 0.000195 283 26.52 20.9 16.1 KM Plot
KIRP rs6053912 chr20:6092355 T/A 0.000115 289 25.82 26.4 9 KM Plot